ttype	patient	gene	classification	type	chr	pos	ref_allele	newbase	context65	cons46
BRCA	BR-0025	SMARCA4	SNP	Missense_Mutation	19	11096874	C	T	31	95
ESO	ESO-0125	SMARCA4	SNP	Splice_Site	19	11113703	A	G	7	88
ESO	ESO-1060	SMARCA4	SNP	Missense_Mutation	19	11123650	C	T	30	96
ESO	ESO-141	SMARCA4	SNP	Missense_Mutation	19	11096995	G	T	47	63
ESO	ESO-1670	SMARCA4	SNP	Missense_Mutation	19	11132513	C	T	19	95
ESO	ESO-169	SMARCA4	SNP	Missense_Mutation	19	11101932	G	A	38	97
ESO	ESO-184	SMARCA4	SNP	Nonsense_Mutation	19	11152055	C	T	27	52
ESO	ESO-184	SMARCA4	SNP	Nonsense_Mutation	19	11168977	C	T	27	74
ESO	ESO-409	SMARCA4	SNP	Missense_Mutation	19	11143994	G	A	38	96
ESO	ESO-539	SMARCA4	SNP	Missense_Mutation	19	11134230	C	T	23	82
ESO	ESO-555	SMARCA4	SNP	Nonsense_Mutation	19	11134266	C	T	23	62
HNSC	HN_00076	SMARCA4	SNP	Missense	19	11143985	G	A	37	96
HNSC	HN_62921	SMARCA4	SNP	Missense	19	11144121	C	A	31	47
LUAD	LUAD-5V8LT	SMARCA4	SNP	Missense_Mutation	19	11141498	G	T	47	95
LUAD	LUAD-B01024	SMARCA4	SNP	Nonsense_Mutation	19	11097586	G	T	43	68
LUAD	LUAD-B02477	SMARCA4	SNP	Nonsense_Mutation	19	11098473	C	T	21	81
LUAD	LUAD-CHTN-MAD06-00668	SMARCA4	SNP	Nonsense_Mutation	19	11118584	G	T	41	95
LUAD	LUAD-CHTN-Z4716A	SMARCA4	SNP	Nonsense_Mutation	19	11144125	C	T	21	96
LUAD	LUAD-D01603	SMARCA4	SNP	Nonsense_Mutation	19	11107045	A	T	1	74
LUAD	LUAD-D02085	SMARCA4	DNP	Nonsense_Mutation	19	11113809	GG	CT	47	72
LUAD	LUAD-F00365	SMARCA4	SNP	Missense_Mutation	19	11107189	G	C	41	93
LUAD	LUAD-F00368	SMARCA4	SNP	Silent	19	11113734	C	T	18	71
LUAD	LUAD-NYU1051S	SMARCA4	SNP	Splice_Site	19	11141570	G	T	44	95
LUAD	LUAD-NYU408	SMARCA4	SNP	Missense_Mutation	19	11144164	G	T	42	96
LUAD	LUAD-QY22Z	SMARCA4	SNP	Missense_Mutation	19	11105609	G	T	46	95
LUAD	LUAD-RT-S01477	SMARCA4	SNP	Silent	19	11152045	G	A	41	41
LUAD	LUAD-RT-S01777	SMARCA4	SNP	Missense_Mutation	19	11123688	G	A	37	96
LUAD	LUAD-RT-S01808	SMARCA4	SNP	Missense_Mutation	19	11121140	A	G	8	88
LUAD	LUAD-RT-S01840	SMARCA4	SNP	Splice_site	19	11169565	G	T	47	95
LUAD	LUAD-S00486	SMARCA4	SNP	Nonsense_Mutation	19	11100069	A	T	5	73
LUAD	LUAD_E00522	SMARCA4	SNP	Splice_Site	19	11107221	G	T	44	93
MED	MD-143	SMARCA4	SNP	Missense_Mutation	19	11143993	C	T	23	96
MED	MD-277	SMARCA4	SNP	Missense_Mutation	19	11132513	C	T	19	95
MED	MD-284	SMARCA4	SNP	Missense_Mutation	19	11132513	C	T	19	95
MED	MD-292	SMARCA4	SNP	Missense_Mutation	19	11143991	A	G	6	88
MEL	ME002	SMARCA4	SNP	Silent	19	11113800	C	T	23	31
MEL	ME009	SMARCA4	SNP	Missense_Mutation	19	11152148	C	T	26	94
MEL	ME014	SMARCA4	SNP	Missense_Mutation	19	11123707	C	T	18	96
MEL	ME017	SMARCA4	SNP	Missense_Mutation	19	11169017	C	T	22	95
MEL	ME032	SMARCA4	SNP	Missense_Mutation	19	11094985	G	A	41	94
MEL	ME044	SMARCA4	SNP	Missense_Mutation	19	11141492	C	T	23	76
MEL	MEL-13447	SMARCA4	DNP	Missense_Mutation	19	11101972	GG	AA	35	67
MEL	MEL-JWCI-WGS-1	SMARCA4	SNP	Missense_Mutation	19	11094895	C	T	30	97
MEL	MEL-JWCI-WGS-11	SMARCA4	SNP	Silent	19	11136987	C	T	23	49
MEL	MEL-JWCI-WGS-18	SMARCA4	SNP	Missense_Mutation	19	11170546	G	A	35	90
MEL	MEL-JWCI-WGS-34	SMARCA4	DNP	Missense_Mutation	19	11144111	CC	AT	26	96
MEL	MEL-JWCI-WGS-39	SMARCA4	SNP	Silent	19	11123771	C	T	29	74
MEL	MEL-Ma-Mel-48	SMARCA4	SNP	Missense_Mutation	19	11094862	C	T	24	97
MEL	MEL-Ma-Mel-48	SMARCA4	SNP	Missense_Mutation	19	11094975	C	T	26	97
MEL	MEL-Ma-Mel-67	SMARCA4	SNP	Silent	19	11144157	C	T	30	83
MM	MM-0465	SMARCA4	SNP	Missense_Mutation	19	11144003	A	T	7	88
OV	TCGA-04-1342	SMARCA4	DNP	Missense_Mutation	19	11144525	AG	CA	11	74
LUAD	TCGA-05-4432	SMARCA4	SNP	Missense_Mutation	19	11138617	A	G	7	62
LUAD	TCGA-05-4432	SMARCA4	SNP	Missense_Mutation	19	11144113	G	A	39	96
LUAD	TCGA-05-5420	SMARCA4	SNP	Nonsense_Mutation	19	11100015	C	T	23	59
OV	TCGA-10-0934	SMARCA4	SNP	Missense_Mutation	19	11134230	C	T	23	82
OV	TCGA-13-0720	SMARCA4	SNP	Missense_Mutation	19	11100090	G	A	42	93
OV	TCGA-13-1501	SMARCA4	SNP	Silent	19	11105512	C	A	29	71
GBM	TCGA-14-3476	SMARCA4	SNP	Silent	19	11136160	C	T	18	57
LUAD	TCGA-17-Z000	SMARCA4	SNP	Missense_Mutation	19	11169030	G	C	33	66
LUAD	TCGA-17-Z017	SMARCA4	DEL	Frame_Shift_Del	19	11107209	C	-	26	93
LUAD	TCGA-17-Z018	SMARCA4	SNP	Missense_Mutation	19	11144075	A	T	3	88
LUSC	TCGA-18-3409	SMARCA4	SNP	Missense_Mutation	19	11094861	C	T	30	97
LUSC	TCGA-18-3409	SMARCA4	SNP	Missense_Mutation	19	11094862	C	T	24	97
LUSC	TCGA-21-1076	SMARCA4	SNP	Missense_Mutation	19	11118656	G	T	33	98
LUSC	TCGA-21-5786	SMARCA4	SNP	Missense_Mutation	19	11105646	G	C	39	95
OV	TCGA-23-1123	SMARCA4	SNP	Missense_Mutation	19	11129635	C	A	19	97
OV	TCGA-24-1474	SMARCA4	SNP	Silent	19	11138568	C	T	29	97
OV	TCGA-24-1604	SMARCA4	SNP	Silent	19	11113731	C	T	27	38
OV	TCGA-24-2260	SMARCA4	SNP	Missense_Mutation	19	11118635	A	G	9	77
GBM	TCGA-28-5207	SMARCA4	SNP	Missense_Mutation	19	11132404	C	T	23	95
LUSC	TCGA-33-6737	SMARCA4	SNP	Missense_Mutation	19	11130342	G	A	37	93
LUAD	TCGA-35-5375	SMARCA4	SNP	Nonsense_Mutation	19	11170531	G	T	33	94
LUSC	TCGA-37-4141	SMARCA4	SNP	Nonsense_Mutation	19	11114047	G	T	33	94
LUAD	TCGA-38-4629	SMARCA4	SNP	Silent	19	11169547	C	T	29	96
LUAD	TCGA-38-4631	SMARCA4	SNP	Nonsense_Mutation	19	11138491	G	T	45	97
LUSC	TCGA-39-5037	SMARCA4	SNP	Missense_Mutation	19	11096052	C	T	23	95
LUAD	TCGA-44-2656	SMARCA4	SNP	Nonsense_Mutation	19	11145653	G	T	41	95
LUAD	TCGA-49-6742	SMARCA4	SNP	Silent	19	11106948	C	A	24	59
LUAD	TCGA-49-6742	SMARCA4	SNP	Nonsense_Mutation	19	11168983	G	T	41	82
LUAD	TCGA-49-6767	SMARCA4	SNP	Nonsense_Mutation	19	11105642	G	T	37	95
LUAD	TCGA-50-5072	SMARCA4	SNP	Missense_Mutation	19	11136141	T	C	55	88
LUAD	TCGA-50-5930	SMARCA4	SNP	Splice_Site	19	11136097	G	T	35	96
LUAD	TCGA-50-5936	SMARCA4	SNP	Nonsense_Mutation	19	11100021	C	T	29	59
LUAD	TCGA-50-6592	SMARCA4	DNP	Nonsense_Mutation	19	11145727	GG	TT	35	56
LUAD	TCGA-55-1596	SMARCA4	SNP	Missense_Mutation	19	11135100	G	C	37	95
LUAD	TCGA-55-6543	SMARCA4	SNP	Missense_Mutation	19	11152224	A	G	3	87
LUAD	TCGA-64-1680	SMARCA4	SNP	Missense_Mutation	19	11132627	C	T	26	95
LUSC	TCGA-66-2785	SMARCA4	SNP	Missense_Mutation	19	11144055	G	C	33	67
LUAD	TCGA-67-3771	SMARCA4	INS	Frame_Shift_Ins	19	11138587	-	A	61	89
LUAD	TCGA-80-5611	SMARCA4	SNP	Nonsense_Mutation	19	11118587	G	T	41	82
LUSC	TCGA-85-6560	SMARCA4	SNP	Splice_Site	19	11096082	G	T	44	95
BRCA	TCGA-A2-A0EQ	SMARCA4	SNP	Missense_Mutation	19	11097047	C	T	28	73
BRCA	TCGA-A2-A0T0	SMARCA4	SNP	Nonsense_Mutation	19	11170528	G	T	41	94
KIRC	TCGA-A3-3319	SMARCA4	SNP	Missense_Mutation	19	11144110	G	A	42	96
KIRC	TCGA-A3-3322	SMARCA4	SNP	Missense_Mutation	19	11098575	G	C	41	95
UCEC	TCGA-A5-A0GB	SMARCA4	SNP	Missense_Mutation	19	11152044	G	A	39	91
UCEC	TCGA-A5-A0VP	SMARCA4	SNP	Silent	19	11098454	C	T	23	25
UCEC	TCGA-A5-A0VP	SMARCA4	SNP	Missense_Mutation	19	11132542	G	A	37	95
UCEC	TCGA-A5-A0VP	SMARCA4	SNP	Missense_Mutation	19	11135079	G	A	40	96
BRCA	TCGA-A8-A06Q	SMARCA4	SNP	Missense_Mutation	19	11170790	G	A	39	73
CRC	TCGA-AA-3518	SMARCA4	SNP	Missense_Mutation	19	11123644	T	G	55	75
CRC	TCGA-AA-3524	SMARCA4	SNP	Missense_Mutation	19	11123782	C	G	24	96
CRC	TCGA-AA-3529	SMARCA4	SNP	Missense_Mutation	19	11138522	G	A	37	97
CRC	TCGA-AA-3558	SMARCA4	SNP	Missense_Mutation	19	11100090	G	A	42	93
CRC	TCGA-AA-3977	SMARCA4	SNP	Missense_Mutation	19	11100016	G	A	37	93
CRC	TCGA-AA-A010	SMARCA4	SNP	Missense_Mutation	19	11100016	G	A	37	93
CRC	TCGA-AA-A022	SMARCA4	SNP	Silent	19	11100020	T	C	62	54
CRC	TCGA-AA-A022	SMARCA4	SNP	Silent	19	11136181	C	T	31	45
CRC	TCGA-AG-4007	SMARCA4	SNP	Missense_Mutation	19	11135019	A	T	8	89
CRC	TCGA-AG-A002	SMARCA4	SNP	Silent	19	11152012	C	T	31	52
CRC	TCGA-AG-A02N	SMARCA4	SNP	Silent	19	11114031	G	A	37	39
UCEC	TCGA-AP-A059	SMARCA4	SNP	Missense_Mutation	19	11096960	G	A	35	59
UCEC	TCGA-AP-A059	SMARCA4	SNP	Missense_Mutation	19	11144050	G	A	41	96
UCEC	TCGA-AP-A0LM	SMARCA4	SNP	Missense_Mutation	19	11152013	G	A	37	94
UCEC	TCGA-AP-A0LT	SMARCA4	SNP	Missense_Mutation	19	11123752	G	A	38	96
UCEC	TCGA-AX-A05Z	SMARCA4	SNP	Missense_Mutation	19	11100016	G	A	37	93
UCEC	TCGA-AX-A063	SMARCA4	SNP	Silent	19	11096950	C	T	23	53
UCEC	TCGA-AX-A0J1	SMARCA4	SNP	Missense_Mutation	19	11095992	G	A	38	96
UCEC	TCGA-AX-A0J1	SMARCA4	SNP	Missense_Mutation	19	11138600	G	A	38	97
UCEC	TCGA-AX-A0J1	SMARCA4	SNP	Missense_Mutation	19	11169536	G	A	38	96
KIRC	TCGA-B0-4817	SMARCA4	SNP	Missense_Mutation	19	11144113	G	T	39	96
KIRC	TCGA-B0-4823	SMARCA4	INS	In_Frame_Ins	19	11100029	-	GAA	63	60
KIRC	TCGA-B0-4843	SMARCA4	SNP	Missense_Mutation	19	11145750	C	A	30	95
KIRC	TCGA-B0-5702	SMARCA4	SNP	Missense_Mutation	19	11132522	C	A	23	82
KIRC	TCGA-B4-5377	SMARCA4	SNP	Missense_Mutation	19	11106894	A	C	3	41
UCEC	TCGA-B5-A0JY	SMARCA4	SNP	Missense_Mutation	19	11152127	A	C	9	67
UCEC	TCGA-B5-A0K2	SMARCA4	SNP	Silent	19	11106978	G	T	47	62
UCEC	TCGA-B5-A11E	SMARCA4	SNP	Silent	19	11105650	C	T	31	49
UCEC	TCGA-B5-A11E	SMARCA4	SNP	Silent	19	11123648	G	A	48	64
UCEC	TCGA-B5-A11H	SMARCA4	SNP	Missense_Mutation	19	11135038	C	T	27	97
BRCA	TCGA-B6-A0X5	SMARCA4	SNP	Missense_Mutation	19	11095980	C	T	31	61
HNSC	TCGA-BA-5151	SMARCA4	SNP	Missense_Mutation	19	11132522	C	T	23	82
HNSC	TCGA-BB-7862	SMARCA4	SNP	Missense_Mutation	19	11144071	G	A	34	96
UCEC	TCGA-BG-A0MG	SMARCA4	SNP	Missense_Mutation	19	11132497	C	T	23	72
UCEC	TCGA-BG-A0VW	SMARCA4	SNP	Silent	19	11096047	G	C	42	52
UCEC	TCGA-BG-A18B	SMARCA4	SNP	Missense_Mutation	19	11169489	G	A	38	96
BRCA	TCGA-BH-A0B8	SMARCA4	DEL	Frame_Shift_Del	19	11144187	GG	-	35	66
KIRC	TCGA-BP-4963	SMARCA4	SNP	Splice_Site	19	11129632	G	A	33	97
KIRC	TCGA-BP-4964	SMARCA4	SNP	Missense_Mutation	19	11144146	C	T	27	51
KIRC	TCGA-BP-4992	SMARCA4	SNP	Missense_Mutation	19	11143976	C	G	27	96
UCEC	TCGA-BS-A0TJ	SMARCA4	SNP	Missense_Mutation	19	11144113	G	A	39	96
UCEC	TCGA-BS-A0UF	SMARCA4	SNP	Missense_Mutation	19	11138559	G	T	45	97
UCEC	TCGA-BS-A0UV	SMARCA4	SNP	Missense_Mutation	19	11136148	G	T	33	96
UCEC	TCGA-BS-A0UV	SMARCA4	SNP	Missense_Mutation	19	11143994	G	A	38	96
UCEC	TCGA-BS-A0V8	SMARCA4	SNP	Missense_Mutation	19	11098590	C	T	27	57
BLCA	TCGA-BT-A20T	SMARCA4	SNP	Missense_Mutation	19	11123707	C	A	18	96
BLCA	TCGA-BT-A2LD	SMARCA4	SNP	Missense_Mutation	19	11141426	C	T	23	81
HNSC	TCGA-CN-4727	SMARCA4	SNP	Missense_Mutation	19	11144002	C	A	25	96
HNSC	TCGA-CN-5356	SMARCA4	SNP	Missense_Mutation	19	11144078	A	G	14	88
HNSC	TCGA-CQ-5326	SMARCA4	SNP	Silent	19	11145805	C	G	29	60
HNSC	TCGA-CQ-5326	SMARCA4	SNP	Missense_Mutation	19	11152041	C	T	29	91
HNSC	TCGA-CR-7367	SMARCA4	SNP	Missense_Mutation	19	11101902	G	A	38	97
HNSC	TCGA-CR-7373	SMARCA4	SNP	Missense_Mutation	19	11132522	C	T	23	82
HNSC	TCGA-CR-7383	SMARCA4	SNP	Missense_Mutation	19	11134270	G	A	37	96
HNSC	TCGA-CR-7402	SMARCA4	SNP	Nonsense_Mutation	19	11144853	G	T	37	95
BLCA	TCGA-CU-A3KJ	SMARCA4	SNP	Missense_Mutation	19	11136115	G	C	33	74
HNSC	TCGA-CV-7250	SMARCA4	SNP	Missense_Mutation	19	11105592	C	A	25	95
HNSC	TCGA-CV-7250	SMARCA4	SNP	Missense_Mutation	19	11141507	G	T	39	95
HNSC	TCGA-CV-7253	SMARCA4	SNP	Missense_Mutation	19	11096928	C	A	32	94
HNSC	TCGA-CV-7254	SMARCA4	SNP	Missense_Mutation	19	11138619	G	T	42	56
HNSC	TCGA-CV-7406	SMARCA4	SNP	Missense_Mutation	19	11135091	G	A	45	96
KIRC	TCGA-CZ-4861	SMARCA4	SNP	Silent	19	11145751	C	A	22	57
KIRC	TCGA-CZ-5453	SMARCA4	SNP	Silent	19	11113809	G	T	47	72
UCEC	TCGA-D1-A103	SMARCA4	SNP	Silent	19	11118598	G	A	38	39
UCEC	TCGA-D1-A103	SMARCA4	SNP	Silent	19	11132466	G	A	38	38
UCEC	TCGA-D1-A103	SMARCA4	SNP	Missense_Mutation	19	11138618	G	T	35	96
UCEC	TCGA-D1-A103	SMARCA4	SNP	Missense_Mutation	19	11150219	G	A	40	49
UCEC	TCGA-D1-A15Z	SMARCA4	DEL	In_Frame_Del	19	11144049	GGA	-	47	82
UCEC	TCGA-D1-A17D	SMARCA4	SNP	Missense_Mutation	19	11145728	G	A	41	95
UCEC	TCGA-D1-A17Q	SMARCA4	SNP	Silent	19	11145796	G	A	34	66
UCEC	TCGA-D1-A17U	SMARCA4	SNP	Silent	19	11123672	C	T	19	46
UCEC	TCGA-D1-A1NU	SMARCA4	SNP	Silent	19	11105674	C	G	29	53
BRCA	TCGA-D8-A140	SMARCA4	SNP	Silent	19	11113752	C	T	30	82
BLCA	TCGA-DK-A1A5	SMARCA4	SNP	Silent	19	11123726	C	T	29	49
BLCA	TCGA-DK-A2HX	SMARCA4	SNP	Missense_Mutation	19	11094864	C	T	31	74
BLCA	TCGA-DK-A3IS	SMARCA4	SNP	Silent	19	11123777	C	T	31	46
BRCA	TCGA-E2-A10C	SMARCA4	SNP	Missense_Mutation	19	11170495	G	A	41	94
BRCA	TCGA-E2-A15C	SMARCA4	SNP	Silent	19	11129678	C	G	23	35
BLCA	TCGA-G2-A2EF	SMARCA4	SNP	Missense_Mutation	19	11151989	G	A	37	94
BLCA	TCGA-G2-A2EO	SMARCA4	SNP	Silent	19	11121153	G	A	33	65
BLCA	TCGA-G2-A2EO	SMARCA4	SNP	Missense_Mutation	19	11121155	G	A	33	68
BLCA	TCGA-G2-A2ES	SMARCA4	SNP	Missense_Mutation	19	11094925	G	A	44	95