ttype	patient	gene	classification	type	chr	pos	ref_allele	newbase	context65	cons46
BRCA	BR-MEX-122	PTCH1	SNP	Silent	9	98241360	G	A	40	52
BRCA	BR-MEX-191	PTCH1	SNP	Silent	9	98268846	C	T	29	59
DLBCL	DLBCL-MAYO_DLBCL_234	PTCH1	SNP	Silent	9	98209512	G	A	38	31
DLBCL	DLBCL-MAYO_DLBCL_234	PTCH1	SNP	Missense_Mutation	9	98242853	C	T	23	64
ESO	ESO-021	PTCH1	SNP	Missense_Mutation	9	98209283	G	A	39	55
ESO	ESO-117	PTCH1	SNP	Splice_site	9	98211352	G	C	36	71
ESO	ESO-1488	PTCH1	SNP	Missense_Mutation	9	98241377	C	T	31	100
ESO	ESO-251	PTCH1	SNP	Silent	9	98211363	G	A	37	47
LUAD	LUAD-B00523	PTCH1	DNP	Missense_Mutation	9	98218614	CC	AA	18	96
LUAD	LUAD-CHTN-3090416	PTCH1	SNP	Silent	9	98209257	C	A	21	57
LUAD	LUAD-F00368	PTCH1	SNP	Missense_Mutation	9	98238357	C	A	27	100
LUAD	LUAD-LC15C	PTCH1	SNP	Missense_Mutation	9	98209340	C	A	24	69
LUAD	LUAD-RT-S01702	PTCH1	SNP	Missense_Mutation	9	98248006	G	A	46	85
LUAD	LUAD-RT-S01769	PTCH1	SNP	Silent	9	98231219	C	T	28	66
LUAD	LUAD-RT-S01777	PTCH1	SNP	Missense_Mutation	9	98209286	C	A	19	71
LUAD	LUAD-S01346	PTCH1	SNP	Silent	9	98209299	G	A	40	43
LUAD	LUAD-S01404	PTCH1	SNP	Missense_Mutation	9	98240446	T	A	55	51
MED	MD-050	PTCH1	SNP	Splice_Site	9	98240469	C	T	24	100
MEL	ME018	PTCH1	SNP	Missense_Mutation	9	98215820	G	A	42	100
MEL	ME034	PTCH1	SNP	Silent	9	98211360	G	A	43	58
MEL	MEL-13567	PTCH1	SNP	Silent	9	98218609	G	A	41	80
MEL	MEL-JWCI-WGS-1	PTCH1	SNP	Missense_Mutation	9	98239123	G	A	34	87
MEL	MEL-JWCI-WGS-12	PTCH1	SNP	Silent	9	98242319	C	T	20	62
MEL	MEL-JWCI-WGS-25	PTCH1	SNP	Missense_Mutation	9	98209264	G	A	37	79
MEL	MEL-JWCI-WGS-35	PTCH1	SNP	Missense_Mutation	9	98209546	G	A	33	65
LUAD	TCGA-05-4382	PTCH1	SNP	Missense_Mutation	9	98220410	C	A	21	99
GBM	TCGA-06-0125	PTCH1	SNP	Nonsense_Mutation	9	98209358	G	A	39	54
OV	TCGA-13-0717	PTCH1	SNP	Missense_Mutation	9	98239936	G	C	47	99
OV	TCGA-13-0807	PTCH1	SNP	Missense_Mutation	9	98239912	C	T	19	99
OV	TCGA-13-1404	PTCH1	SNP	Missense_Mutation	9	98220500	A	T	6	76
OV	TCGA-13-1483	PTCH1	SNP	Missense_Mutation	9	98278988	C	G	32	74
LUAD	TCGA-17-Z045	PTCH1	SNP	Silent	9	98242852	C	A	18	55
LUSC	TCGA-18-3412	PTCH1	SNP	Splice_site	9	98232095	C	A	24	86
LUSC	TCGA-21-1076	PTCH1	SNP	Missense_Mutation	9	98229610	C	A	23	98
LUSC	TCGA-21-5786	PTCH1	SNP	Missense_Mutation	9	98215785	C	T	22	87
LUSC	TCGA-21-5786	PTCH1	SNP	Missense_Mutation	9	98278916	G	T	39	45
OV	TCGA-23-1024	PTCH1	SNP	Synonymous	9	98218666	C	T	28	64
OV	TCGA-24-2293	PTCH1	SNP	Missense_Mutation	9	98209442	G	T	47	96
OV	TCGA-25-1326	PTCH1	SNP	Missense_Mutation	9	98218563	C	A	25	83
LUSC	TCGA-34-2600	PTCH1	SNP	Missense_Mutation	9	98232122	C	G	32	100
LUAD	TCGA-35-3615	PTCH1	SNP	Missense_Mutation	9	98218671	C	A	18	84
LUAD	TCGA-35-3621	PTCH1	SNP	Missense_Mutation	9	98268820	A	T	1	86
LUAD	TCGA-49-6742	PTCH1	SNP	Missense_Mutation	9	98242859	G	A	35	65
LUAD	TCGA-49-6745	PTCH1	SNP	Missense_Mutation	9	98229610	C	A	23	98
LUAD	TCGA-49-6745	PTCH1	SNP	Missense_Mutation	9	98279003	G	T	39	60
LUSC	TCGA-66-2786	PTCH1	SNP	Missense_Mutation	9	98244316	C	T	32	99
LUAD	TCGA-67-3771	PTCH1	SNP	Missense_Mutation	9	98242849	C	G	30	100
LUAD	TCGA-73-4662	PTCH1	SNP	Nonsense_Mutation	9	98209232	C	A	30	96
BRCA	TCGA-A1-A0SE	PTCH1	SNP	Silent	9	98220334	G	A	38	47
BRCA	TCGA-A2-A0ER	PTCH1	SNP	Missense_Mutation	9	98211487	G	A	37	83
BRCA	TCGA-A8-A09Q	PTCH1	SNP	Missense_Mutation	9	98231318	C	A	32	53
BRCA	TCGA-A8-A09Q	PTCH1	SNP	Silent	9	98231321	C	G	27	42
CRC	TCGA-AA-3525	PTCH1	SNP	Silent	9	98220430	G	A	40	52
CRC	TCGA-AA-3543	PTCH1	SNP	Missense_Mutation	9	98238392	G	A	40	98
CRC	TCGA-AA-3554	PTCH1	SNP	Missense_Mutation	9	98229625	G	A	40	98
CRC	TCGA-AA-3693	PTCH1	SNP	Silent	9	98209656	A	T	11	49
CRC	TCGA-AA-3715	PTCH1	SNP	Missense_Mutation	9	98231241	G	A	39	94
CRC	TCGA-AA-3864	PTCH1	SNP	Missense_Mutation	9	98218623	C	T	19	96
CRC	TCGA-AA-3949	PTCH1	SNP	Silent	9	98231267	C	T	27	26
CRC	TCGA-AA-3977	PTCH1	SNP	Silent	9	98229462	G	T	45	60
CRC	TCGA-AA-A00N	PTCH1	SNP	Silent	9	98231321	C	T	27	42
CRC	TCGA-AA-A00R	PTCH1	SNP	Missense_Mutation	9	98244256	A	T	4	56
CRC	TCGA-AA-A010	PTCH1	SNP	Missense_Mutation	9	98209264	G	A	37	79
CRC	TCGA-AA-A01P	PTCH1	DEL	Frame_Shift_Del	9	98211549	G	-	47	41
CRC	TCGA-AA-A01R	PTCH1	SNP	Missense_Mutation	9	98278975	C	T	30	53
CRC	TCGA-AA-A022	PTCH1	SNP	Silent	9	98229498	G	A	40	46
AML	TCGA-AB-2811	PTCH1	SNP	Missense_Mutation	9	98220525	C	T	23	97
AML	TCGA-AB-2968	PTCH1	SNP	Silent	9	98229498	G	A	40	46
CRC	TCGA-AG-3600	PTCH1	SNP	Silent	9	98232133	G	A	38	26
CRC	TCGA-AG-3611	PTCH1	SNP	Silent	9	98231267	C	T	27	26
CRC	TCGA-AG-A002	PTCH1	SNP	Missense_Mutation	9	98238333	G	A	38	65
UCEC	TCGA-AP-A051	PTCH1	SNP	Missense_Mutation	9	98224161	C	T	31	97
UCEC	TCGA-AP-A051	PTCH1	SNP	Silent	9	98224213	T	A	50	54
UCEC	TCGA-AP-A051	PTCH1	SNP	Missense_Mutation	9	98239912	C	T	19	99
UCEC	TCGA-AP-A051	PTCH1	SNP	Missense_Mutation	9	98242313	C	T	25	100
UCEC	TCGA-AP-A056	PTCH1	SNP	Missense_Mutation	9	98224149	C	T	31	70
UCEC	TCGA-AP-A059	PTCH1	SNP	Silent	9	98209398	G	A	39	41
UCEC	TCGA-AP-A059	PTCH1	SNP	Silent	9	98211390	G	A	37	46
UCEC	TCGA-AP-A059	PTCH1	SNP	Silent	9	98224162	G	A	38	31
UCEC	TCGA-AP-A059	PTCH1	SNP	Missense_Mutation	9	98231257	A	G	15	86
UCEC	TCGA-AP-A059	PTCH1	SNP	Silent	9	98242843	G	A	36	80
UCEC	TCGA-AP-A0LE	PTCH1	SNP	Missense_Mutation	9	98209264	G	A	37	79
UCEC	TCGA-AP-A0LM	PTCH1	SNP	Silent	9	98215885	G	A	37	37
UCEC	TCGA-AP-A0LM	PTCH1	SNP	Missense_Mutation	9	98268758	A	C	4	85
BRCA	TCGA-AR-A1AH	PTCH1	SNP	Missense_Mutation	9	98278972	T	C	62	48
UCEC	TCGA-AX-A05T	PTCH1	SNP	Nonsense_Mutation	9	98231085	G	T	45	94
UCEC	TCGA-AX-A05Z	PTCH1	SNP	Silent	9	98209263	C	T	31	42
UCEC	TCGA-AX-A05Z	PTCH1	SNP	Missense_Mutation	9	98212216	G	T	33	75
UCEC	TCGA-AX-A0J0	PTCH1	SNP	Silent	9	98220556	G	A	37	36
UCEC	TCGA-AX-A0J1	PTCH1	SNP	Silent	9	98209227	G	A	38	50
KIRC	TCGA-B0-4713	PTCH1	SNP	Missense_Mutation	9	98240433	T	G	64	65
KIRC	TCGA-B0-4718	PTCH1	SNP	Missense_Mutation	9	98231217	G	T	43	94
KIRC	TCGA-B0-4814	PTCH1	SNP	Missense_Mutation	9	98240363	G	T	39	64
KIRC	TCGA-B0-4819	PTCH1	SNP	Silent	9	98239880	T	C	58	52
UCEC	TCGA-B5-A0JY	PTCH1	SNP	Silent	9	98218603	G	A	37	45
UCEC	TCGA-B5-A0JY	PTCH1	SNP	Missense_Mutation	9	98239054	C	A	32	86
UCEC	TCGA-B5-A0JY	PTCH1	SNP	Missense_Mutation	9	98242810	C	A	32	78
UCEC	TCGA-B5-A0JZ	PTCH1	SNP	Missense_Mutation	9	98209397	C	T	19	96
UCEC	TCGA-B5-A11E	PTCH1	SNP	Silent	9	98215774	G	A	37	57
UCEC	TCGA-B5-A11E	PTCH1	SNP	Missense_Mutation	9	98220525	C	A	23	97
UCEC	TCGA-B5-A11E	PTCH1	SNP	Nonsense_Mutation	9	98232138	G	A	37	60
UCEC	TCGA-B5-A11N	PTCH1	SNP	Silent	9	98209263	C	T	31	42
UCEC	TCGA-B5-A11N	PTCH1	SNP	Missense_Mutation	9	98268780	G	T	33	57
BRCA	TCGA-B6-A0RN	PTCH1	SNP	Missense_Mutation	9	98215818	C	T	19	81
KIRC	TCGA-B8-4153	PTCH1	SNP	Missense_Mutation	9	98220440	C	T	20	84
HNSC	TCGA-BB-7864	PTCH1	SNP	Missense_Mutation	9	98209339	C	T	26	61
UCEC	TCGA-BG-A0M8	PTCH1	SNP	Missense_Mutation	9	98209328	T	C	58	57
UCEC	TCGA-BG-A0VV	PTCH1	SNP	Missense_Mutation	9	98209504	C	T	19	67
BRCA	TCGA-BH-A0DS	PTCH1	SNP	Missense_Mutation	9	98218641	C	T	23	96
KIRC	TCGA-BP-4330	PTCH1	SNP	Silent	9	98211564	G	A	43	50
KIRC	TCGA-BP-4337	PTCH1	SNP	Missense_Mutation	9	98231217	G	T	43	94
KIRC	TCGA-BP-4768	PTCH1	SNP	Missense_Mutation	9	98242754	C	T	18	100
KIRC	TCGA-BP-4777	PTCH1	SNP	Missense_Mutation	9	98240434	T	G	63	92
KIRC	TCGA-BP-5001	PTCH1	SNP	Silent	9	98209386	C	G	27	37
UCEC	TCGA-BS-A0UF	PTCH1	SNP	Missense_Mutation	9	98240408	T	C	58	79
UCEC	TCGA-BS-A0UF	PTCH1	SNP	Nonsense_Mutation	9	98244448	C	A	32	99
BLCA	TCGA-BT-A0YX	PTCH1	SNP	Missense_Mutation	9	98232132	C	G	31	100
BRCA	TCGA-C8-A12W	PTCH1	SNP	Missense_Mutation	9	98209699	G	A	37	49
BLCA	TCGA-CF-A1HS	PTCH1	SNP	Missense_Mutation	9	98239043	C	G	29	87
HNSC	TCGA-CN-4728	PTCH1	SNP	Missense_Mutation	9	98209663	G	A	41	70
HNSC	TCGA-CN-5359	PTCH1	SNP	Splice_Site	9	98238315	C	A	18	100
HNSC	TCGA-CN-6012	PTCH1	SNP	Missense_Mutation	9	98239831	G	C	45	99
HNSC	TCGA-CR-6481	PTCH1	SNP	Missense_Mutation	9	98242295	C	G	29	66
HNSC	TCGA-CR-7388	PTCH1	DEL	Frame_Shift_Del	9	98270530	C	-	26	52
HNSC	TCGA-CR-7394	PTCH1	SNP	Silent	9	98268846	C	G	29	59
HNSC	TCGA-CR-7395	PTCH1	SNP	Missense_Mutation	9	98209652	C	T	23	69
HNSC	TCGA-CR-7397	PTCH1	SNP	Silent	9	98220448	C	A	26	45
BLCA	TCGA-CU-A0YR	PTCH1	DEL	In_Frame_Del	9	98278973	CTC	-	32	70
HNSC	TCGA-CV-6940	PTCH1	SNP	Silent	9	98218642	G	A	37	49
HNSC	TCGA-CV-6951	PTCH1	SNP	Nonsense_Mutation	9	98239882	C	A	24	86
HNSC	TCGA-CV-7424	PTCH1	SNP	Nonsense_Mutation	9	98242784	C	T	21	76
UCEC	TCGA-D1-A0ZO	PTCH1	SNP	Splice_site	9	98224138	C	A	24	94
UCEC	TCGA-D1-A103	PTCH1	SNP	Missense_Mutation	9	98242736	C	T	27	100
UCEC	TCGA-D1-A15X	PTCH1	SNP	Silent	9	98231279	G	A	40	51
UCEC	TCGA-D1-A177	PTCH1	SNP	Missense_Mutation	9	98209484	G	T	43	73
UCEC	TCGA-D1-A17B	PTCH1	SNP	Missense_Mutation	9	98221975	C	T	19	82
UCEC	TCGA-D1-A17Q	PTCH1	SNP	Missense_Mutation	9	98221900	G	A	42	95
UCEC	TCGA-D1-A17U	PTCH1	SNP	Missense_Mutation	9	98218673	G	A	40	98
HNSC	TCGA-D6-6825	PTCH1	SNP	Missense_Mutation	9	98229683	C	G	22	80
BLCA	TCGA-DK-A1AD	PTCH1	SNP	Silent	9	98221997	C	A	23	30
BLCA	TCGA-DK-A3IN	PTCH1	SNP	Splice_site	9	98229398	C	T	22	97
BRCA	TCGA-E2-A14N	PTCH1	SNP	Missense_Mutation	9	98221930	C	G	32	96
BLCA	TCGA-G2-A2EF	PTCH1	SNP	Missense_Mutation	9	98229643	C	T	32	99
BLCA	TCGA-G2-A3IB	PTCH1	SNP	Missense_Mutation	9	98209683	C	A	28	51
HNSC	TCGA-HL-7533	PTCH1	SNP	Missense_Mutation	9	98209310	C	G	29	67