ttype	patient	gene	classification	type	chr	pos	ref_allele	newbase	context65	cons46
BRCA	BR-0019	ALPK2	SNP	Silent	18	56204173	G	A	41	47
BRCA	BR-MEX-082	ALPK2	SNP	Missense	18	56204606	C	G	30	46
HNSC	HN_62237	ALPK2	SNP	Synonymous	18	56184188	G	T	47	74
HNSC	HN_62814	ALPK2	SNP	Missense	18	56202745	G	C	48	53
LUAD	LUAD-B02216	ALPK2	SNP	Missense_Mutation	18	56202491	G	T	47	56
LUAD	LUAD-CHTN-MAD06-00668	ALPK2	SNP	Missense_Mutation	18	56149131	C	A	22	54
LUAD	LUAD-S01315	ALPK2	SNP	Missense_Mutation	18	56246350	A	T	7	51
LUAD	LUAD-S01413	ALPK2	SNP	Missense_Mutation	18	56246077	C	G	28	54
LUAD	LUAD_E00565	ALPK2	SNP	Silent	18	56171335	C	A	19	6
MED	MD-208	ALPK2	SNP	Missense_Mutation	18	56246446	C	A	22	42
MEL	ME002	ALPK2	SNP	Missense_Mutation	18	56202537	C	T	30	50
MEL	ME009	ALPK2	SNP	Missense_Mutation	18	56202504	C	T	30	60
MEL	ME037	ALPK2	SNP	Missense_Mutation	18	56246627	C	T	29	83
MEL	MEL-13447	ALPK2	SNP	Missense_Mutation	18	56182238	C	T	21	99
MEL	MEL-13447	ALPK2	SNP	Missense_Mutation	18	56203394	G	A	41	78
MEL	MEL-13600	ALPK2	SNP	Missense_Mutation	18	56202735	C	T	24	56
MEL	MEL-JWCI-27	ALPK2	SNP	Missense_Mutation	18	56246222	G	A	47	52
MEL	MEL-JWCI-WGS-1	ALPK2	SNP	Missense_Mutation	18	56246744	G	A	41	56
MEL	MEL-JWCI-WGS-11	ALPK2	SNP	Silent	18	56203708	C	T	32	56
MEL	MEL-JWCI-WGS-11	ALPK2	SNP	Missense_Mutation	18	56204265	G	A	41	66
MEL	MEL-JWCI-WGS-12	ALPK2	SNP	Missense_Mutation	18	56203749	C	T	32	60
MEL	MEL-JWCI-WGS-21	ALPK2	SNP	Silent	18	56204758	G	A	43	51
MEL	MEL-JWCI-WGS-29	ALPK2	SNP	Missense_Mutation	18	56171364	G	A	33	97
MEL	MEL-JWCI-WGS-39	ALPK2	SNP	Missense_Mutation	18	56204265	G	A	41	66
MEL	MEL-JWCI-WGS-7	ALPK2	SNP	Missense_Mutation	18	56205321	C	T	30	53
MEL	MEL-Ma-Mel-19	ALPK2	SNP	Silent	18	56149106	A	T	15	51
MEL	MEL-Ma-Mel-19	ALPK2	SNP	Silent	18	56203222	T	G	53	39
MEL	MEL-Ma-Mel-35	ALPK2	SNP	Missense_Mutation	18	56246924	C	T	31	74
MEL	MEL-Ma-Mel-37	ALPK2	SNP	Missense_Mutation	18	56247217	G	A	43	70
MEL	MEL-Ma-Mel-48	ALPK2	SNP	Missense_Mutation	18	56171295	T	C	62	89
MEL	MEL-Ma-Mel-65	ALPK2	SNP	Missense_Mutation	18	56205321	C	T	30	53
MEL	MEL-Ma-Mel-67	ALPK2	SNP	Splice_site	18	56182313	C	T	30	98
MEL	MEL-Ma-Mel-67	ALPK2	SNP	Missense_Mutation	18	56203139	G	A	47	48
MM	MM-0546	ALPK2	SNP	Missense_Mutation	18	56203979	G	C	33	52
MM	MM-0605	ALPK2	SNP	Silent	18	56165307	G	A	40	54
NB	NB-1977	ALPK2	SNP	Missense_Mutation	18	56202553	C	A	29	50
OV	TCGA-04-1364	ALPK2	SNP	Silent	18	56246466	C	T	23	29
LUAD	TCGA-05-4390	ALPK2	SNP	Missense_Mutation	18	56184325	C	T	27	55
LUAD	TCGA-05-4396	ALPK2	SNP	Missense_Mutation	18	56171336	G	T	39	97
LUAD	TCGA-05-4396	ALPK2	SNP	Silent	18	56202339	G	T	39	50
LUAD	TCGA-05-4396	ALPK2	SNP	Missense_Mutation	18	56246709	C	A	21	61
LUAD	TCGA-05-4396	ALPK2	SNP	Silent	18	56247216	G	T	47	53
LUAD	TCGA-05-4396	ALPK2	SNP	Missense_Mutation	18	56247488	G	T	35	53
LUAD	TCGA-05-4396	ALPK2	SNP	Silent	18	56247543	C	A	23	45
LUAD	TCGA-05-4397	ALPK2	SNP	Missense_Mutation	18	56205026	C	G	32	58
LUAD	TCGA-05-4427	ALPK2	SNP	Missense_Mutation	18	56274666	G	T	42	81
LUAD	TCGA-05-4430	ALPK2	SNP	Missense_Mutation	18	56202933	G	T	46	30
LUAD	TCGA-05-4432	ALPK2	DEL	Frame_Shift_Del	18	56204617	G	-	47	50
GBM	TCGA-06-0209	ALPK2	SNP	Silent	18	56203942	C	T	31	50
GBM	TCGA-06-6698	ALPK2	SNP	Missense_Mutation	18	56203541	A	G	16	24
OV	TCGA-09-1665	ALPK2	SNP	Missense_Mutation	18	56191190	G	A	34	78
OV	TCGA-10-0930	ALPK2	SNP	Missense_Mutation	18	56205396	C	G	32	66
OV	TCGA-13-0916	ALPK2	SNP	Missense_Mutation	18	56203991	G	C	41	51
LUAD	TCGA-17-Z001	ALPK2	SNP	Missense_Mutation	18	56247641	T	A	55	47
LUAD	TCGA-17-Z012	ALPK2	SNP	Missense_Mutation	18	56184260	G	T	40	53
LUAD	TCGA-17-Z030	ALPK2	SNP	Silent	18	56204296	A	T	11	62
LUAD	TCGA-17-Z043	ALPK2	SNP	Missense_Mutation	18	56204135	A	T	9	50
LUAD	TCGA-17-Z058	ALPK2	SNP	Missense_Mutation	18	56247385	G	T	48	63
LUAD	TCGA-17-Z061	ALPK2	SNP	Silent	18	56203480	G	A	42	43
LUAD	TCGA-17-Z062	ALPK2	SNP	Missense_Mutation	18	56191220	C	G	25	64
LUSC	TCGA-18-3409	ALPK2	SNP	Missense_Mutation	18	56203022	C	T	32	47
LUSC	TCGA-18-5592	ALPK2	SNP	Silent	18	56202301	C	G	23	12
LUSC	TCGA-22-4599	ALPK2	DEL	Frame_Shift_Del	18	56203118	C	-	18	49
LUSC	TCGA-22-5489	ALPK2	SNP	Missense_Mutation	18	56247322	C	A	32	36
LUSC	TCGA-22-5492	ALPK2	SNP	Missense_Mutation	18	56203604	A	G	10	42
OV	TCGA-24-1562	ALPK2	SNP	Silent	18	56204113	C	T	24	51
OV	TCGA-25-2398	ALPK2	SNP	Silent	18	56203552	G	A	43	47
GBM	TCGA-27-2528	ALPK2	SNP	Missense_Mutation	18	56171191	A	C	6	48
LUSC	TCGA-34-5239	ALPK2	SNP	Missense_Mutation	18	56184260	G	C	40	53
LUSC	TCGA-37-3789	ALPK2	SNP	Missense_Mutation	18	56202524	A	G	16	30
LUSC	TCGA-37-4133	ALPK2	SNP	Splice_site	18	56196470	G	A	34	73
LUSC	TCGA-39-5029	ALPK2	SNP	Missense_Mutation	18	56274624	C	T	31	57
LUSC	TCGA-43-6770	ALPK2	SNP	Missense_Mutation	18	56246255	G	A	45	55
LUAD	TCGA-44-2656	ALPK2	SNP	Missense_Mutation	18	56203934	G	T	34	48
LUAD	TCGA-44-2656	ALPK2	SNP	Missense_Mutation	18	56247124	G	C	43	35
LUAD	TCGA-44-2659	ALPK2	SNP	Missense_Mutation	18	56202436	C	A	20	44
LUAD	TCGA-44-3396	ALPK2	SNP	Missense_Mutation	18	56203560	C	G	29	52
LUAD	TCGA-44-3918	ALPK2	SNP	Missense_Mutation	18	56184357	C	A	28	62
LUAD	TCGA-49-4501	ALPK2	SNP	Missense_Mutation	18	56205126	G	T	37	48
LUAD	TCGA-49-4510	ALPK2	SNP	Missense_Mutation	18	56202593	G	T	35	56
LUAD	TCGA-50-5051	ALPK2	SNP	Missense_Mutation	18	56203629	C	A	23	52
LUAD	TCGA-50-5936	ALPK2	SNP	Missense_Mutation	18	56246449	A	C	6	32
LUSC	TCGA-51-4079	ALPK2	SNP	Missense_Mutation	18	56246930	C	T	31	57
LUSC	TCGA-60-2720	ALPK2	SNP	Missense_Mutation	18	56247398	C	T	29	57
LUSC	TCGA-60-2725	ALPK2	SNP	Missense_Mutation	18	56191230	A	T	15	85
LUAD	TCGA-64-1677	ALPK2	SNP	Silent	18	56204800	C	A	17	48
LUAD	TCGA-64-5775	ALPK2	SNP	Missense_Mutation	18	56247074	G	T	43	65
LUSC	TCGA-66-2742	ALPK2	SNP	Silent	18	56246130	G	A	46	48
LUSC	TCGA-66-2744	ALPK2	SNP	Nonsense_Mutation	18	56149153	T	A	62	90
LUSC	TCGA-66-2759	ALPK2	SNP	Missense_Mutation	18	56274632	T	G	55	59
LUSC	TCGA-66-2771	ALPK2	SNP	Nonsense_Mutation	18	56202164	G	C	45	50
LUSC	TCGA-66-2778	ALPK2	SNP	Missense_Mutation	18	56278980	G	A	48	68
LUSC	TCGA-66-2785	ALPK2	SNP	Nonsense_Mutation	18	56205344	G	C	45	51
LUSC	TCGA-66-2800	ALPK2	SNP	Missense_Mutation	18	56274624	C	T	31	57
LUAD	TCGA-73-4668	ALPK2	SNP	Missense_Mutation	18	56203575	C	T	32	58
UCEC	TCGA-A5-A0GB	ALPK2	SNP	Missense_Mutation	18	56202968	G	T	35	41
UCEC	TCGA-A5-A0GH	ALPK2	DEL	Frame_Shift_Del	18	56246440	T	-	56	46
UCEC	TCGA-A5-A0GI	ALPK2	SNP	Silent	18	56203687	G	T	39	36
UCEC	TCGA-A5-A0GI	ALPK2	DEL	Frame_Shift_Del	18	56246440	T	-	56	46
CRC	TCGA-A6-3807	ALPK2	SNP	Silent	18	56184320	C	T	23	8
BRCA	TCGA-A8-A08B	ALPK2	SNP	Missense_Mutation	18	56191061	A	C	7	83
BRCA	TCGA-A8-A08F	ALPK2	SNP	Missense_Mutation	18	56182234	T	C	62	90
CRC	TCGA-AA-3525	ALPK2	SNP	Missense_Mutation	18	56202302	G	A	40	51
CRC	TCGA-AA-3554	ALPK2	SNP	Silent	18	56184260	G	A	40	53
CRC	TCGA-AA-3821	ALPK2	SNP	Missense_Mutation	18	56246888	A	G	6	50
CRC	TCGA-AA-3844	ALPK2	SNP	Missense_Mutation	18	56182291	G	A	42	98
CRC	TCGA-AA-3977	ALPK2	SNP	Missense_Mutation	18	56202169	C	A	32	56
CRC	TCGA-AA-3977	ALPK2	SNP	Silent	18	56203132	G	A	38	53
CRC	TCGA-AA-3984	ALPK2	SNP	Missense_Mutation	18	56247733	G	T	33	53
CRC	TCGA-AA-A00N	ALPK2	SNP	Missense_Mutation	18	56204906	A	G	14	51
CRC	TCGA-AA-A00N	ALPK2	SNP	Missense_Mutation	18	56278975	G	T	34	61
CRC	TCGA-AA-A010	ALPK2	SNP	Missense_Mutation	18	56202377	G	A	38	49
CRC	TCGA-AA-A010	ALPK2	SNP	Silent	18	56247690	G	A	34	46
CRC	TCGA-AG-A002	ALPK2	SNP	Missense_Mutation	18	56149069	C	T	31	64
CRC	TCGA-AG-A002	ALPK2	SNP	Nonsense_Mutation	18	56171304	C	A	32	97
CRC	TCGA-AG-A002	ALPK2	SNP	Missense_Mutation	18	56184373	C	A	32	98
CRC	TCGA-AG-A002	ALPK2	SNP	Nonsense_Mutation	18	56204919	C	A	32	77
CRC	TCGA-AG-A002	ALPK2	SNP	Missense_Mutation	18	56204957	G	T	33	53
CRC	TCGA-AG-A002	ALPK2	SNP	Missense_Mutation	18	56247439	G	T	35	50
KIRC	TCGA-AK-3425	ALPK2	SNP	Missense_Mutation	18	56171280	C	A	30	97
BRCA	TCGA-AO-A12A	ALPK2	SNP	Missense_Mutation	18	56203486	T	A	54	62
UCEC	TCGA-AP-A051	ALPK2	SNP	Missense_Mutation	18	56184342	C	T	27	52
UCEC	TCGA-AP-A051	ALPK2	SNP	Missense_Mutation	18	56203086	C	A	28	48
UCEC	TCGA-AP-A059	ALPK2	SNP	Silent	18	56202886	G	A	42	55
UCEC	TCGA-AP-A059	ALPK2	SNP	Missense_Mutation	18	56203579	C	A	24	50
UCEC	TCGA-AP-A059	ALPK2	SNP	Missense_Mutation	18	56246090	G	T	33	53
UCEC	TCGA-AP-A059	ALPK2	SNP	Nonsense_Mutation	18	56246303	C	A	32	70
UCEC	TCGA-AP-A0LM	ALPK2	SNP	Missense_Mutation	18	56149264	C	T	22	98
UCEC	TCGA-AP-A0LM	ALPK2	SNP	Missense_Mutation	18	56184288	C	T	27	98
UCEC	TCGA-AX-A05S	ALPK2	SNP	Silent	18	56203528	A	G	11	53
UCEC	TCGA-AX-A05Z	ALPK2	SNP	Missense_Mutation	18	56202263	C	A	26	53
UCEC	TCGA-AX-A05Z	ALPK2	SNP	Nonsense_Mutation	18	56247380	C	A	32	70
UCEC	TCGA-AX-A060	ALPK2	DEL	Frame_Shift_Del	18	56246440	T	-	56	46
UCEC	TCGA-AX-A0J0	ALPK2	SNP	Missense_Mutation	18	56196326	C	A	32	69
UCEC	TCGA-AX-A0J0	ALPK2	SNP	Missense_Mutation	18	56202169	C	A	32	56
UCEC	TCGA-AX-A0J0	ALPK2	SNP	Missense_Mutation	18	56204672	T	G	52	61
KIRC	TCGA-B0-5707	ALPK2	SNP	Missense_Mutation	18	56246350	A	G	7	51
UCEC	TCGA-B5-A0JY	ALPK2	SNP	Missense_Mutation	18	56202272	T	G	62	75
UCEC	TCGA-B5-A0JY	ALPK2	SNP	Nonsense_Mutation	18	56204037	C	A	32	66
UCEC	TCGA-B5-A0JY	ALPK2	SNP	Missense_Mutation	18	56204858	G	T	33	55
UCEC	TCGA-B5-A0JY	ALPK2	SNP	Missense_Mutation	18	56247069	C	A	32	64
UCEC	TCGA-B5-A0JY	ALPK2	SNP	Missense_Mutation	18	56274592	G	T	33	62
UCEC	TCGA-B5-A11G	ALPK2	DEL	Frame_Shift_Del	18	56246440	T	-	56	46
UCEC	TCGA-B5-A11J	ALPK2	DEL	Frame_Shift_Del	18	56246440	T	-	56	46
UCEC	TCGA-B5-A11R	ALPK2	SNP	Missense_Mutation	18	56149107	G	A	33	73
UCEC	TCGA-BG-A0M4	ALPK2	SNP	Silent	18	56203428	G	T	39	55
BRCA	TCGA-BH-A0HY	ALPK2	SNP	Missense_Mutation	18	56203182	C	G	32	64
BRCA	TCGA-BH-A18L	ALPK2	SNP	Silent	18	56203789	G	A	40	39
KIRC	TCGA-BP-5169	ALPK2	SNP	Silent	18	56202373	T	C	64	38
KIRC	TCGA-BP-5176	ALPK2	SNP	Missense_Mutation	18	56204268	A	G	4	48
KIRC	TCGA-BP-5184	ALPK2	SNP	Missense_Mutation	18	56205081	C	T	29	59
UCEC	TCGA-BS-A0TC	ALPK2	SNP	Missense_Mutation	18	56202972	G	T	45	52
UCEC	TCGA-BS-A0U8	ALPK2	SNP	Missense_Mutation	18	56149187	C	T	25	68
UCEC	TCGA-BS-A0UF	ALPK2	SNP	Missense_Mutation	18	56203089	C	T	31	50
UCEC	TCGA-BS-A0UF	ALPK2	SNP	Missense_Mutation	18	56203607	T	G	56	49
UCEC	TCGA-BS-A0UF	ALPK2	SNP	Missense_Mutation	18	56205041	T	G	50	39
UCEC	TCGA-BS-A0UJ	ALPK2	SNP	Silent	18	56171353	C	A	26	48
UCEC	TCGA-BS-A0UJ	ALPK2	SNP	Missense_Mutation	18	56246698	T	G	55	53
UCEC	TCGA-BS-A0UJ	ALPK2	SNP	Missense_Mutation	18	56247586	T	A	50	55
KIRC	TCGA-CJ-4892	ALPK2	SNP	Missense_Mutation	18	56184174	T	C	54	89
KIRC	TCGA-CJ-4894	ALPK2	SNP	Missense_Mutation	18	56246200	G	A	34	45
KIRC	TCGA-CJ-4902	ALPK2	SNP	Silent	18	56205106	A	T	7	40
KIRC	TCGA-CJ-5686	ALPK2	SNP	Missense_Mutation	18	56205356	G	A	48	47
HNSC	TCGA-CN-4740	ALPK2	SNP	Silent	18	56203584	G	A	33	59
HNSC	TCGA-CN-4740	ALPK2	SNP	Missense_Mutation	18	56203904	G	A	40	45
HNSC	TCGA-CN-5359	ALPK2	DEL	Frame_Shift_Del	18	56278955	C	-	32	61
HNSC	TCGA-CQ-5325	ALPK2	SNP	Missense_Mutation	18	56204982	C	T	24	55
HNSC	TCGA-CR-7388	ALPK2	SNP	Nonsense_Mutation	18	56202141	T	A	63	63
HNSC	TCGA-CR-7399	ALPK2	SNP	Missense_Mutation	18	56247140	C	T	19	37
HNSC	TCGA-CV-5430	ALPK2	SNP	Silent	18	56184167	G	T	41	51
HNSC	TCGA-CV-7180	ALPK2	SNP	Silent	18	56171233	C	T	32	97
UCEC	TCGA-D1-A103	ALPK2	SNP	Silent	18	56203072	C	T	23	46
UCEC	TCGA-D1-A103	ALPK2	SNP	Missense_Mutation	18	56203878	C	T	30	65
UCEC	TCGA-D1-A103	ALPK2	SNP	Missense_Mutation	18	56247236	G	A	40	41
UCEC	TCGA-D1-A15X	ALPK2	SNP	Missense_Mutation	18	56182259	C	T	28	76
UCEC	TCGA-D1-A169	ALPK2	SNP	Silent	18	56202715	A	T	7	51
UCEC	TCGA-D1-A16X	ALPK2	SNP	Silent	18	56246925	G	A	40	58
UCEC	TCGA-D1-A17Q	ALPK2	SNP	Missense_Mutation	18	56246486	T	C	50	51
UCEC	TCGA-D1-A17Q	ALPK2	SNP	Nonsense_Mutation	18	56247608	C	A	32	51
UCEC	TCGA-D1-A17Q	ALPK2	SNP	Missense_Mutation	18	56247745	G	A	37	69
HNSC	TCGA-D6-6516	ALPK2	SNP	Missense_Mutation	18	56246869	C	T	30	54
HNSC	TCGA-D6-6824	ALPK2	SNP	Missense_Mutation	18	56203268	T	C	50	30
BLCA	TCGA-DK-A2I4	ALPK2	SNP	Missense_Mutation	18	56247584	C	T	29	54
BRCA	TCGA-E2-A1LH	ALPK2	SNP	Missense_Mutation	18	56247679	T	G	60	58
BLCA	TCGA-G2-A3IE	ALPK2	SNP	Missense_Mutation	18	56203518	C	G	32	48